The GeneProject was born to give a hand to those people who work in the DNA World with small software contributions.
All Software made by GeneProject are FREEWARE and could be used afterwards have read the ’Freeware License Agreement’.
Blast Parser - The Excel style viewer
Parsing a Blast output consists in extracting all the main information contained in the file and represent them in a different way, an Excel style way.
Each row of the Excel representation contains the whole alignment including the statistical information, such: E-Value, Score, % of Identity, etc. plus several new added facilities obtained by a preliminary automated analysis.
This compact structure permits to see better and faster differences among alignments with the opportunity to filter, sort and/or group alignments by statistical values.
Manual of Blast Parser (PDF document)
PoInTree: A Polar and Interactive Phylogenetic Tree
PoInTree (Polar and Interactive Tree) is an application that allows to build, visualize and customize phylogenetic trees in a polar interactive and highly flexible view.
PSI Protein Classifier: Automation of the PSI-BLAST results analysis
PSI Protein Classifier is a new program that allows to summarize the consecutive and independent PSI-BLAST iteration results. Iterative screening of the protein database allows to reveal feasible evolutionary relationship among protein families and divide them into subfamilies on the basis of statistically significant sequence similarity analysis (E-value analysis).
D.G. Naumoff "Phylogenetic analysis of a protein family" Zbio V.1. Art.3 (2006)
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